{"name":"ellipse-nuclei-segmentation","display_name":"Ellipse Nuclei Segmentation","visibility":"public","icon":"","categories":[],"schema_version":"0.2.1","on_activate":null,"on_deactivate":null,"contributions":{"commands":[{"id":"ellipse-nuclei-segmentation.nuclei_annotator_widget","title":"Nuclei Annotator","python_name":"ellipse_nuclei_segmentation._plugin:NucleiAnnotatorWidget","short_title":null,"category":null,"icon":null,"enablement":null}],"readers":null,"writers":null,"widgets":[{"command":"ellipse-nuclei-segmentation.nuclei_annotator_widget","display_name":"Nuclei Annotator","autogenerate":false}],"sample_data":null,"themes":null,"menus":{},"submenus":null,"keybindings":null,"configuration":[]},"package_metadata":{"metadata_version":"2.4","name":"ellipse-nuclei-segmentation","version":"0.1.4","dynamic":["license-file"],"platform":null,"supported_platform":null,"summary":"A plugin to navigate a .nd2 file (confocal movie) and annotate nuclei using ellipses.","description":"# ellipse-nuclei-segmentation\n\n[![License MIT](https://img.shields.io/pypi/l/ellipse-nuclei-segmentation.svg?color=green)](https://github.com/rmaguado/ellipse-nuclei-segmentation/raw/main/LICENSE)\n[![PyPI](https://img.shields.io/pypi/v/ellipse-nuclei-segmentation.svg?color=green)](https://pypi.org/project/ellipse-nuclei-segmentation)\n[![Python Version](https://img.shields.io/pypi/pyversions/ellipse-nuclei-segmentation.svg?color=green)](https://python.org)\n[![tests](https://github.com/rmaguado/ellipse-nuclei-segmentation/workflows/tests/badge.svg)](https://github.com/rmaguado/ellipse-nuclei-segmentation/actions)\n[![codecov](https://codecov.io/gh/rmaguado/ellipse-nuclei-segmentation/branch/main/graph/badge.svg)](https://codecov.io/gh/rmaguado/ellipse-nuclei-segmentation)\n[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/ellipse-nuclei-segmentation)](https://napari-hub.org/plugins/ellipse-nuclei-segmentation)\n[![npe2](https://img.shields.io/badge/plugin-npe2-blue?link=https://napari.org/stable/plugins/index.html)](https://napari.org/stable/plugins/index.html)\n[![Copier](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/copier-org/copier/master/img/badge/badge-grayscale-inverted-border-purple.json)](https://github.com/copier-org/copier)\n\nA plugin to navigate a .nd2 file (confocal movie) and annotate nuclei using ellipses.\n\n----------------------------------\n\nThis [napari] plugin was generated with [copier] using the [napari-plugin-template] (None).\n\n<!--\nDon't miss the full getting started guide to set up your new package:\nhttps://github.com/napari/napari-plugin-template#getting-started\n\nand review the napari docs for plugin developers:\nhttps://napari.org/stable/plugins/index.html\n-->\n\n## Installation\n\nYou can install `ellipse-nuclei-segmentation` via [pip]:\n\n```bash\npip install ellipse-nuclei-segmentation\n```\n\nIf napari is not already installed, you can install `ellipse-nuclei-segmentation` with napari and Qt via:\n\n```bash\npip install \"ellipse-nuclei-segmentation[all]\"\n```\n\n\nTo install latest development version:\n\n```bash\npip install git+https://github.com/rmaguado/ellipse-nuclei-segmentation.git\n```\n\n\n\n## Contributing\n\nContributions are very welcome. Tests can be run with [tox], please ensure\nthe coverage at least stays the same before you submit a pull request.\n\n## License\n\nDistributed under the terms of the [MIT] license,\n\"ellipse-nuclei-segmentation\" is free and open source software\n\n## Issues\n\nIf you encounter any problems, please [file an issue] along with a detailed description.\n\n[napari]: https://github.com/napari/napari\n[copier]: https://copier.readthedocs.io/en/stable/\n[MIT]: http://opensource.org/licenses/MIT\n[BSD-3]: http://opensource.org/licenses/BSD-3-Clause\n[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt\n[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt\n[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0\n[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt\n[napari-plugin-template]: https://github.com/napari/napari-plugin-template\n\n[file an issue]: https://github.com/rmaguado/ellipse-nuclei-segmentation/issues\n\n[tox]: https://tox.readthedocs.io/en/latest/\n[pip]: https://pypi.org/project/pip/\n[PyPI]: https://pypi.org/\n","description_content_type":"text/markdown","keywords":null,"home_page":null,"download_url":null,"author":"Ruben Moreno-Aguado","author_email":"ruben.morenoaguado@gmail.com","maintainer":null,"maintainer_email":null,"license":null,"classifier":["Development Status :: 2 - Pre-Alpha","Framework :: napari","Intended Audience :: Developers","Operating System :: OS Independent","Programming Language :: Python","Programming Language :: Python :: 3","Programming Language :: Python :: 3 :: Only","Programming Language :: Python :: 3.10","Programming Language :: Python :: 3.11","Programming Language :: Python :: 3.12","Programming Language :: Python :: 3.13","Topic :: Scientific/Engineering :: Image Processing"],"requires_dist":["numpy","nd2","einops","magicgui","qtpy","scikit-image","napari[all]; extra == \"all\""],"requires_python":">=3.10","requires_external":null,"project_url":["Bug Tracker, https://github.com/rmaguado/ellipse-nuclei-segmentation/issues","Documentation, https://github.com/rmaguado/ellipse-nuclei-segmentation#README.md","Source Code, https://github.com/rmaguado/ellipse-nuclei-segmentation","User Support, https://github.com/rmaguado/ellipse-nuclei-segmentation/issues"],"provides_extra":["all"],"provides_dist":null,"obsoletes_dist":null},"npe1_shim":false}