{"name":"napari-clusters-plotter","display_name":"napari clusters plotter","visibility":"public","icon":"","categories":[],"schema_version":"0.2.1","on_activate":null,"on_deactivate":null,"contributions":{"commands":[{"id":"napari-clusters-plotter.plotter","title":"Clusters Plotter","python_name":"napari_clusters_plotter:PlotterWidget","short_title":null,"category":null,"icon":null,"enablement":null},{"id":"napari-clusters-plotter.Dimensionality_Reduction","title":"Dimensionality Reduction","python_name":"napari_clusters_plotter:DimensionalityReductionWidget","short_title":null,"category":null,"icon":null,"enablement":null},{"id":"napari-clusters-plotter.Clustering","title":"Clustering","python_name":"napari_clusters_plotter:ClusteringWidget","short_title":null,"category":null,"icon":null,"enablement":null},{"id":"napari-clusters-plotter.bbbc_sample_data","title":"Load bbbc sample 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paths)"}],"themes":null,"menus":{"napari/layers/visualize":[{"command":"napari-clusters-plotter.plotter","when":null,"group":null,"alt":null}],"napari/layers/measure":[{"command":"napari-clusters-plotter.Dimensionality_Reduction","when":null,"group":null,"alt":null}],"napari/layers/classify":[{"command":"napari-clusters-plotter.Clustering","when":null,"group":null,"alt":null}]},"submenus":null,"keybindings":null,"configuration":[]},"package_metadata":{"metadata_version":"2.4","name":"napari-clusters-plotter","version":"0.10.0","dynamic":["license-file"],"platform":null,"supported_platform":null,"summary":"A plugin to use with napari for clustering objects according to their properties","description":"# napari-clusters-plotter\n\n[![License](https://img.shields.io/pypi/l/napari-clusters-plotter.svg?color=green)](https://github.com/lazigu/napari-clusters-plotter/raw/master/LICENSE)\n[![PyPI](https://img.shields.io/pypi/v/napari-clusters-plotter.svg?color=green)](https://pypi.org/project/napari-clusters-plotter)\n[![Python Version](https://img.shields.io/pypi/pyversions/napari-clusters-plotter.svg?color=green)](https://python.org)\n[![Anaconda-Server Badge](https://anaconda.org/conda-forge/napari-clusters-plotter/badges/version.svg)](https://anaconda.org/conda-forge/napari-clusters-plotter)\n[![tests](https://github.com/BiAPoL/napari-clusters-plotter/actions/workflows/test_and_deploy.yml/badge.svg)](https://github.com/BiAPoL/napari-clusters-plotter/actions/workflows/test_and_deploy.yml)\n[![codecov](https://codecov.io/gh/BiAPoL/napari-clusters-plotter/branch/main/graph/badge.svg?token=R6W2KO1NJ8)](https://codecov.io/gh/BiAPoL/napari-clusters-plotter)\n[![pre-commit](https://img.shields.io/badge/pre--commit-enabled-brightgreen?logo=pre-commit&logoColor=white)](https://github.com/pre-commit/pre-commit)\n[![Anaconda-Server Badge](https://anaconda.org/conda-forge/napari-clusters-plotter/badges/downloads.svg)](https://anaconda.org/conda-forge/napari-clusters-plotter)\n[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-clusters-plotter)](https://www.napari-hub.org/plugins/napari-clusters-plotter)\n[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.15670497.svg)](https://doi.org/10.5281/zenodo.15670497)\n\nA napari-plugin for clustering objects according to their properties.\n\n## [Documentation](https://biapol.github.io/napari-clusters-plotter/)\n\nThe documentation for the napari-clusters-plotter is available under the above link.\n\n## License\n\nDistributed under the terms of the [BSD-3] license,\n\"napari-clusters-plotter\" is free and open source software\n\n## Acknowledgements\nThis project was supported by the Deutsche Forschungsgemeinschaft under Germany’s Excellence Strategy – EXC2068 - Cluster of Excellence \"Physics of Life\" of TU Dresden.\nThis project has been made possible in part by grant number [2021-240341 (Napari plugin accelerator grant)](https://chanzuckerberg.com/science/programs-resources/imaging/napari/improving-image-processing/) from the Chan Zuckerberg Initiative DAF, an advised fund of the Silicon Valley Community Foundation.\n\n## Issues\n\nIf you encounter any problems, please [file an issue](https://github.com/BiAPoL/napari-clusters-plotter/issues) along\nwith a detailed description.\n\n[napari]: https://github.com/napari/napari\n[Cookiecutter]: https://github.com/audreyr/cookiecutter\n[@napari]: https://github.com/napari\n[MIT]: http://opensource.org/licenses/MIT\n[BSD-3]: http://opensource.org/licenses/BSD-3-Clause\n[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt\n[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt\n[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0\n[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt\n[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin\n\n[napari]: https://github.com/napari/napari\n[pytest]: https://docs.pytest.org/en/7.0.x/\n[pip]: https://pypi.org/project/pip/\n[PyPI]: https://pypi.org/\n[conda]: https://docs.conda.io/projects/conda/en/latest/\n","description_content_type":"text/markdown","keywords":null,"home_page":null,"download_url":null,"author":"Laura Zigutyte, Ryan Savill, Marcelo Zoccoler, Thorsten Wagner, Robert Haase","author_email":"Johannes Soltwedel <johannes_richard.soltwedel@tu-dresden.de>","maintainer":null,"maintainer_email":null,"license":"Copyright (c) 2022, DFG Cluster of Excellence \"Physics of Life\" TU Dresden: Robert Haase, Laura Zigutyte, Marcello Zoccoler, Ryan Savill, Johannes Müller and Max Planck Institute of Molecular Physiology Dortmund: Thorsten Wagner\nAll rights reserved.\n\nRedistribution and use in source and binary forms, with or without\nmodification, are permitted provided that the following conditions are met:\n\n* Redistributions of source code must retain the above copyright notice, this\n  list of conditions and the following disclaimer.\n\n* Redistributions in binary form must reproduce the above copyright notice,\n  this list of conditions and the following disclaimer in the documentation\n  and/or other materials provided with the distribution.\n\n* Neither the name of napari-clusters-plotter nor the names of its\n  contributors may be used to endorse or promote products derived from\n  this software without specific prior written permission.\n\nTHIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS \"AS IS\"\nAND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE\nIMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE\nDISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE\nFOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL\nDAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR\nSERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER\nCAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,\nOR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE\nOF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.\n","classifier":["Development Status :: 2 - Pre-Alpha","Framework :: napari","Intended Audience :: Developers","License :: OSI Approved :: BSD License","Operating System :: OS Independent","Programming Language :: Python","Programming Language :: Python :: 3","Programming Language :: Python :: 3 :: Only","Programming Language :: Python :: 3.10","Programming Language :: Python :: 3.11","Programming Language :: Python :: 3.12","Programming Language :: Python :: 3.13","Topic :: Scientific/Engineering :: Image Processing"],"requires_dist":["numpy","magicgui","qtpy","napari","npe2","scikit-learn","pandas","umap-learn","scikit-image","scipy","biaplotter>=0.3.1","imagecodecs","tox; extra == \"testing\"","pytest; extra == \"testing\"","pytest-cov; extra == \"testing\"","pytest-qt; extra == \"testing\"","napari; extra == \"testing\"","pyqt5; extra == \"testing\""],"requires_python":">=3.9","requires_external":null,"project_url":["Bug Tracker, https://github.com/BiAPoL/napari-clusters-plotter/issues","Documentation, https://github.com/BiAPoL/napari-clusters-plotter","Source Code, https://github.com/BiAPoL/napari-clusters-plotter","User Support, https://github.com/BiAPoL/napari-clusters-plotter/issues"],"provides_extra":["testing"],"provides_dist":null,"obsoletes_dist":null},"npe1_shim":false}